Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm37375-201ENSMUST00000193859 387 ntBASIC7.1□□□□□ -1.27
Col2a1P28481 Gm37385-201ENSMUST00000195223 387 ntBASIC7.1□□□□□ -1.27
Col2a1P28481 Gm43798-201ENSMUST00000202056 394 ntBASIC7.1□□□□□ -1.27
Col2a1P28481 AC161586.1-201ENSMUST00000223232 547 ntBASIC7.1□□□□□ -1.27
Col2a1P28481 AC158525.1-201ENSMUST00000223806 576 ntBASIC7.1□□□□□ -1.27
Col2a1P28481 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col2a1P28481 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.09□□□□□ -1.27
Col2a1P28481 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.09□□□□□ -1.27
Col2a1P28481 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
Col2a1P28481 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC7.09□□□□□ -1.27
Col2a1P28481 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.09□□□□□ -1.27
Col2a1P28481 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Col2a1P28481 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Col2a1P28481 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC7.09□□□□□ -1.27
Col2a1P28481 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 Gm24719-201ENSMUST00000157520 110 ntBASIC7.09□□□□□ -1.27
Col2a1P28481 Gm25363-201ENSMUST00000158850 245 ntBASIC7.09□□□□□ -1.27
Col2a1P28481 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 Gm37203-201ENSMUST00000191618 385 ntBASIC7.09□□□□□ -1.27
Col2a1P28481 Gm38291-201ENSMUST00000193671 259 ntBASIC7.09□□□□□ -1.27
Col2a1P28481 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.09□□□□□ -1.27
Col2a1P28481 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC7.09□□□□□ -1.27
Col2a1P28481 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC7.09□□□□□ -1.27
Col2a1P28481 AC140409.4-201ENSMUST00000215757 538 ntBASIC7.09□□□□□ -1.27
Col2a1P28481 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Col2a1P28481 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Col2a1P28481 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Col2a1P28481 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col2a1P28481 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Col2a1P28481 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
Col2a1P28481 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Col2a1P28481 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.09□□□□□ -1.28
Col2a1P28481 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Col2a1P28481 Gm37238-201ENSMUST00000195552 2390 ntBASIC7.09□□□□□ -1.28
Col2a1P28481 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Col2a1P28481 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Col2a1P28481 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col2a1P28481 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Col2a1P28481 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Mir466f-4-201ENSMUST00000116930 121 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm13991-201ENSMUST00000120190 648 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm11925-201ENSMUST00000121375 535 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm14349-201ENSMUST00000137155 902 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm26211-201ENSMUST00000158578 129 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Col2a1P28481 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms