Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Sdc1P18828 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Sdc1P18828 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 Gm44895-201ENSMUST00000206670 1538 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm23062-201ENSMUST00000102349 110 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm25608-201ENSMUST00000104021 132 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm25311-201ENSMUST00000104136 132 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm25167-201ENSMUST00000104188 120 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm16007-201ENSMUST00000117837 286 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm13160-201ENSMUST00000118441 627 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm15778-201ENSMUST00000118469 608 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm12135-201ENSMUST00000119170 466 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm15049-201ENSMUST00000120474 463 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm11383-201ENSMUST00000121346 807 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm15538-201ENSMUST00000121410 313 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm24236-201ENSMUST00000157794 134 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm22361-201ENSMUST00000158435 176 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Sdc1P18828 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm18501-201ENSMUST00000185363 664 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm42977-201ENSMUST00000197497 144 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm17824-201ENSMUST00000197690 805 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm2860-201ENSMUST00000199226 707 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm44837-201ENSMUST00000206863 717 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm18060-201ENSMUST00000207407 564 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm7394-201ENSMUST00000209138 1032 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm4247-201ENSMUST00000211441 1042 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm7392-201ENSMUST00000217815 345 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm7252-201ENSMUST00000223284 456 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc1P18828 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc1P18828 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc1P18828 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc1P18828 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.02□□□□□ -1.61
Sdc1P18828 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.02□□□□□ -1.61
Sdc1P18828 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.02□□□□□ -1.61
Sdc1P18828 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc1P18828 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.02□□□□□ -1.61
Sdc1P18828 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc1P18828 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms