Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm28149-201ENSMUST00000187102 378 ntBASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Gm28768-201ENSMUST00000189034 378 ntBASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Gm43383-201ENSMUST00000195981 469 ntBASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Gm19088-201ENSMUST00000198800 566 ntBASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim3Q9R1R2 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm11462-201ENSMUST00000117749 562 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm13207-201ENSMUST00000119862 773 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm12101-201ENSMUST00000121590 390 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm3810-201ENSMUST00000122413 476 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm8089-201ENSMUST00000122463 968 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm22214-201ENSMUST00000157563 172 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm3140-201ENSMUST00000163523 481 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm9064-201ENSMUST00000163579 566 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm24812-201ENSMUST00000175315 284 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm27601-201ENSMUST00000184794 127 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm42799-201ENSMUST00000201331 328 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm17997-201ENSMUST00000211801 840 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm18586-201ENSMUST00000217265 518 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.01□□□□□ -1.45
Trim3Q9R1R2 Gm42881-201ENSMUST00000198636 3344 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm43469-201ENSMUST00000196084 4634 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm10723-201ENSMUST00000195366 6918 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm22284-201ENSMUST00000104132 132 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Rnu11-201ENSMUST00000104135 134 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm9836-201ENSMUST00000117132 216 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm14733-201ENSMUST00000117680 133 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm5793-201ENSMUST00000119393 630 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm11472-201ENSMUST00000121305 556 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms