Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm23437-201ENSMUST00000104036 127 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm12643-201ENSMUST00000116078 374 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm12944-201ENSMUST00000119262 463 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm15538-201ENSMUST00000121410 313 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm12321-201ENSMUST00000121485 804 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm24225-201ENSMUST00000158825 98 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm27684-201ENSMUST00000183778 80 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Mir7084-201ENSMUST00000183876 70 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm29496-201ENSMUST00000189854 693 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm8101-201ENSMUST00000192796 478 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm37111-201ENSMUST00000193250 634 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC8.78□□□□□ -1
Ube3bQ9ES34 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm8539-201ENSMUST00000199822 501 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm44252-201ENSMUST00000204187 330 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.78□□□□□ -1
Ube3bQ9ES34 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm45497-201ENSMUST00000211701 740 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC8.78□□□□□ -1
Ube3bQ9ES34 AC116589.1-201ENSMUST00000220634 327 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm18338-201ENSMUST00000222381 560 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 AC154576.2-203ENSMUST00000224736 253 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 AC101205.1-201ENSMUST00000227916 907 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ube3bQ9ES34 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm25189-201ENSMUST00000083911 164 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.78□□□□□ -1
Ube3bQ9ES34 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ube3bQ9ES34 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ube3bQ9ES34 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Ube3bQ9ES34 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ube3bQ9ES34 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ube3bQ9ES34 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Ube3bQ9ES34 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ube3bQ9ES34 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ube3bQ9ES34 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Ube3bQ9ES34 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm25631-201ENSMUST00000104390 130 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm14307-201ENSMUST00000118930 291 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm6591-201ENSMUST00000121063 434 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm6977-201ENSMUST00000121568 512 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm11910-201ENSMUST00000121624 432 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm14990-201ENSMUST00000122354 445 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm14297-201ENSMUST00000129110 291 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm26355-201ENSMUST00000158220 105 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm22262-201ENSMUST00000158713 86 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm17155-201ENSMUST00000165969 473 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm16531-201ENSMUST00000180658 967 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm1972-201ENSMUST00000181606 964 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Mir6357-201ENSMUST00000184246 104 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm28428-201ENSMUST00000188886 697 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm29369-201ENSMUST00000190674 615 ntBASIC8.77□□□□□ -1.01
Ube3bQ9ES34 Gm37295-201ENSMUST00000192186 109 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms