Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm24888-201ENSMUST00000104387 130 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm7746-201ENSMUST00000120966 503 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm23259-201ENSMUST00000158318 303 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm9285-201ENSMUST00000177691 697 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm27185-201ENSMUST00000184296 247 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm29156-201ENSMUST00000187764 499 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm43576-201ENSMUST00000197937 871 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm43459-201ENSMUST00000202093 331 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm2996-201ENSMUST00000211398 537 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm5928-201ENSMUST00000221839 466 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm10540-201ENSMUST00000097581 276 ntBASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lima1Q9ERG0 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lima1Q9ERG0 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Rnu11-201ENSMUST00000104135 134 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm12842-201ENSMUST00000117298 476 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm14847-201ENSMUST00000121978 519 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Mir425-201ENSMUST00000083645 85 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lima1Q9ERG0 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms