Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm9894-201ENSMUST00000171257 2904 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm24173-201ENSMUST00000104130 128 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm14513-201ENSMUST00000117403 123 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm15502-201ENSMUST00000121449 208 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm27998-201ENSMUST00000184902 361 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm20926-201ENSMUST00000194457 696 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm18600-201ENSMUST00000207205 505 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm5324-201ENSMUST00000208115 476 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm19340-201ENSMUST00000221995 345 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Rnu11-201ENSMUST00000104135 134 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm23311-201ENSMUST00000104152 134 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm15181-201ENSMUST00000120142 177 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm14300-201ENSMUST00000120800 946 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm23426-201ENSMUST00000122483 318 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm11545-201ENSMUST00000146507 375 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm25057-201ENSMUST00000157366 88 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm27348-201ENSMUST00000184511 170 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm37380-201ENSMUST00000193752 397 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm8454-201ENSMUST00000196980 811 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm42581-201ENSMUST00000201774 966 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm7554-201ENSMUST00000202282 574 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Mir3068-201ENSMUST00000083004 136 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm42975-201ENSMUST00000200612 1491 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.93□□□□□ -1.46
Cdc40Q9DC48 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms