Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm25123-201ENSMUST00000179154 121 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm25353-201ENSMUST00000179366 121 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm22992-201ENSMUST00000179496 121 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm25892-201ENSMUST00000179867 121 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm24092-201ENSMUST00000180257 121 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm26607-201ENSMUST00000180661 867 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm37511-201ENSMUST00000192901 294 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm38237-201ENSMUST00000193366 376 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm8869-201ENSMUST00000195222 947 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Chmp2aQ9DB34 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Gm15765-201ENSMUST00000118407 910 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Gm13626-201ENSMUST00000119435 402 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Gm5125-201ENSMUST00000148614 624 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Gm25904-201ENSMUST00000158491 143 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Gm29663-201ENSMUST00000186962 853 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp2aQ9DB34 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm14098-201ENSMUST00000119295 623 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Mir5107-201ENSMUST00000175586 88 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm37901-201ENSMUST00000195107 514 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm9535-201ENSMUST00000218499 768 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm22351-201ENSMUST00000083925 107 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Chmp2aQ9DB34 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms