Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm23632-201ENSMUST00000175289 125 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm5244-202ENSMUST00000189517 743 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm19124-201ENSMUST00000191041 832 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm18985-201ENSMUST00000196472 1079 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm43867-201ENSMUST00000203860 525 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm5324-201ENSMUST00000208115 476 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm45072-201ENSMUST00000208673 929 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.2□□□□□ -1.42
Cstf3Q99LI7 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm12573-201ENSMUST00000118158 286 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm22276-201ENSMUST00000122469 129 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm26486-201ENSMUST00000158021 110 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm23259-201ENSMUST00000158318 303 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm6434-201ENSMUST00000163316 372 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm28023-201ENSMUST00000184556 60 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm27825-201ENSMUST00000184586 60 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Mir6987-201ENSMUST00000184789 73 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm38291-201ENSMUST00000193671 259 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm43157-201ENSMUST00000198223 412 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm9367-201ENSMUST00000205703 546 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm44896-201ENSMUST00000206190 772 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm45246-201ENSMUST00000210820 367 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm18040-201ENSMUST00000217922 827 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm3213-201ENSMUST00000219296 441 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.19□□□□□ -1.42
Cstf3Q99LI7 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf3Q99LI7 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms