Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm44565-201ENSMUST00000208194 269 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm2099-201ENSMUST00000220979 412 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 AC167192.1-201ENSMUST00000225908 139 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm6863-201ENSMUST00000052882 636 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm15159-201ENSMUST00000117062 764 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm14729-201ENSMUST00000118373 689 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm2199-201ENSMUST00000119065 874 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm6987-201ENSMUST00000119319 428 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 BC064078-201ENSMUST00000122939 570 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm25556-201ENSMUST00000158077 144 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm24768-201ENSMUST00000158512 94 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm8609-201ENSMUST00000182967 998 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm20561-201ENSMUST00000188131 292 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm28801-201ENSMUST00000188761 449 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm3511-201ENSMUST00000199823 204 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm44227-201ENSMUST00000203576 241 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm44279-201ENSMUST00000205154 472 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm44856-201ENSMUST00000206639 304 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm3678-201ENSMUST00000218888 492 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm9267-201ENSMUST00000222831 404 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 AC116395.1-201ENSMUST00000225480 1143 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Snora21-201ENSMUST00000082967 137 ntBASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms