Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm18586-201ENSMUST00000217265 518 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm7557-201ENSMUST00000221935 865 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm22103-201ENSMUST00000116733 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm26475-201ENSMUST00000116769 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm23620-201ENSMUST00000116812 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm25042-201ENSMUST00000116856 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm25540-201ENSMUST00000116880 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm8855-201ENSMUST00000118888 878 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm6987-201ENSMUST00000119319 428 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm13357-201ENSMUST00000120528 537 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm23550-201ENSMUST00000179003 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm25123-201ENSMUST00000179154 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm25353-201ENSMUST00000179366 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm22992-201ENSMUST00000179496 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm25892-201ENSMUST00000179867 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm24092-201ENSMUST00000180257 121 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm19340-201ENSMUST00000221995 345 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm9985-201ENSMUST00000044101 510 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm15732-201ENSMUST00000079794 480 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.07□□□□□ -1.44
Lsm1Q8VC85 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm15153-201ENSMUST00000119867 274 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm6620-201ENSMUST00000120113 715 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm11434-201ENSMUST00000122379 629 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm8648-201ENSMUST00000122457 221 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Mir1903-201ENSMUST00000122574 80 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms