Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm37551-201ENSMUST00000195556 2861 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm1966-201ENSMUST00000184540 7293 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm12115-201ENSMUST00000119969 447 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm24363-201ENSMUST00000158440 311 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm27019-201ENSMUST00000183056 404 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Mir7058-201ENSMUST00000184637 75 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm7832-201ENSMUST00000202613 880 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm20274-201ENSMUST00000206967 584 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm45696-201ENSMUST00000212088 985 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm8911-201ENSMUST00000213986 652 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm43496-201ENSMUST00000201682 3001 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm19113-201ENSMUST00000217552 1828 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm16044-201ENSMUST00000118475 450 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm13988-201ENSMUST00000119363 288 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm13462-201ENSMUST00000121472 961 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm22094-201ENSMUST00000158976 117 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm44108-201ENSMUST00000203525 422 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm18537-201ENSMUST00000205709 989 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 AC091783.2-201ENSMUST00000224626 740 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm37776-201ENSMUST00000193471 2497 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 CT030159.1-201ENSMUST00000221580 2261 ntBASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ccdc9Q8VC31 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm37951-201ENSMUST00000192963 3032 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm42607-201ENSMUST00000200221 3393 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm13207-201ENSMUST00000119862 773 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm12804-201ENSMUST00000121030 999 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm24782-201ENSMUST00000157641 132 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm18006-201ENSMUST00000177411 662 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm24923-201ENSMUST00000178201 88 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm28894-201ENSMUST00000185214 615 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms