Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm20819-201ENSMUST00000191091 925 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm38231-201ENSMUST00000192030 347 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm18012-201ENSMUST00000204558 773 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm46103-201ENSMUST00000217614 341 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 A1cf-203ENSMUST00000224400 1204 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Clrn1Q8K445 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Clrn1Q8K445 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Clrn1Q8K445 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Clrn1Q8K445 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Clrn1Q8K445 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Clrn1Q8K445 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm12535-201ENSMUST00000121025 484 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm12313-201ENSMUST00000121347 421 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm12222-201ENSMUST00000121368 260 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm12181-201ENSMUST00000121448 531 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm15096-201ENSMUST00000121918 878 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm11358-201ENSMUST00000122310 373 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm22915-201ENSMUST00000157615 136 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm24680-201ENSMUST00000158759 126 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm21392-201ENSMUST00000182950 972 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm27507-201ENSMUST00000184199 93 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28739-201ENSMUST00000185415 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28219-201ENSMUST00000185452 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28542-201ENSMUST00000185545 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28303-201ENSMUST00000185642 747 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm29244-201ENSMUST00000185825 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm29437-201ENSMUST00000185865 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm29412-201ENSMUST00000185869 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28910-201ENSMUST00000185921 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28812-201ENSMUST00000185963 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm29468-201ENSMUST00000185978 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28854-201ENSMUST00000186218 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28636-201ENSMUST00000186353 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28452-201ENSMUST00000186623 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm29298-201ENSMUST00000186704 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28185-201ENSMUST00000186815 694 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28227-201ENSMUST00000186862 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28796-201ENSMUST00000186905 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm29659-201ENSMUST00000187063 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28473-201ENSMUST00000187325 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28682-201ENSMUST00000187430 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28738-201ENSMUST00000187480 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28949-201ENSMUST00000187805 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28773-201ENSMUST00000187925 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm29319-201ENSMUST00000188060 696 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm29422-201ENSMUST00000188062 694 ntBASIC6.38□□□□□ -1.39
Clrn1Q8K445 Gm28787-201ENSMUST00000188357 696 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms