Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm22267-201ENSMUST00000104008 131 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm12849-201ENSMUST00000120013 739 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm12140-201ENSMUST00000121214 544 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm12451-201ENSMUST00000121636 633 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm15164-201ENSMUST00000122203 271 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm15187-201ENSMUST00000122329 264 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Mir1900-201ENSMUST00000122714 78 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm25660-201ENSMUST00000158470 104 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm7281-201ENSMUST00000160010 543 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm19185-201ENSMUST00000196365 643 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm43160-201ENSMUST00000196453 421 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm45626-201ENSMUST00000210093 361 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 AC154828.2-201ENSMUST00000220908 1070 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm8607-201ENSMUST00000221864 431 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm18620-201ENSMUST00000222295 324 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 AC106830.1-201ENSMUST00000228032 1003 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm24621-201ENSMUST00000082679 140 ntBASIC6.7□□□□□ -1.34
CopaQ8CIE6 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CopaQ8CIE6 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CopaQ8CIE6 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CopaQ8CIE6 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.69□□□□□ -1.34
CopaQ8CIE6 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CopaQ8CIE6 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CopaQ8CIE6 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.69□□□□□ -1.34
CopaQ8CIE6 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CopaQ8CIE6 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CopaQ8CIE6 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CopaQ8CIE6 Gm13532-201ENSMUST00000120373 240 ntBASIC6.69□□□□□ -1.34
CopaQ8CIE6 Gm13357-201ENSMUST00000120528 537 ntBASIC6.69□□□□□ -1.34
CopaQ8CIE6 Gm14300-201ENSMUST00000120800 946 ntBASIC6.69□□□□□ -1.34
CopaQ8CIE6 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms