Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Ccdc28bQ8CEG5 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ccdc28bQ8CEG5 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ccdc28bQ8CEG5 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Ccdc28bQ8CEG5 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.21□□□□□ -1.41
Ccdc28bQ8CEG5 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Ccdc28bQ8CEG5 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm13679-201ENSMUST00000118678 484 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm22728-201ENSMUST00000158087 129 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm23639-201ENSMUST00000175078 132 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm3121-201ENSMUST00000187086 406 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm18428-201ENSMUST00000194986 791 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm31579-201ENSMUST00000203306 966 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm17822-201ENSMUST00000204307 351 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm18907-201ENSMUST00000209719 932 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm9237-201ENSMUST00000221499 548 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 CT030260.1-201ENSMUST00000223243 442 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.21□□□□□ -1.42
Ccdc28bQ8CEG5 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm13141-201ENSMUST00000117417 456 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm12104-201ENSMUST00000120359 979 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm11761-201ENSMUST00000121392 445 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm16260-201ENSMUST00000155141 304 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm28580-201ENSMUST00000186767 88 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm18875-201ENSMUST00000188563 882 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm37477-201ENSMUST00000195215 884 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm43383-201ENSMUST00000195981 469 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm22149-202ENSMUST00000196259 137 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm4525-201ENSMUST00000198831 254 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc28bQ8CEG5 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms