Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Vmn1r82-202ENSMUST00000191002 918 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm44857-201ENSMUST00000208331 196 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm18704-201ENSMUST00000219736 446 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 AC122295.1-201ENSMUST00000223476 388 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm7204-201ENSMUST00000062591 600 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm24696-201ENSMUST00000083878 134 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm42440-201ENSMUST00000197906 2284 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Pcdhb7Q8CDY9 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm14197-201ENSMUST00000117480 1049 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm12641-201ENSMUST00000117874 985 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm12851-201ENSMUST00000117920 421 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm14630-201ENSMUST00000118057 246 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm13458-201ENSMUST00000118239 367 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm14158-201ENSMUST00000118409 308 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm12959-201ENSMUST00000119396 403 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm11901-201ENSMUST00000120412 437 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm13593-201ENSMUST00000121329 692 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Mir1903-201ENSMUST00000122574 80 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm22811-201ENSMUST00000157468 154 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm23497-201ENSMUST00000157738 130 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm25265-201ENSMUST00000158520 347 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm24347-201ENSMUST00000158711 142 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm16184-201ENSMUST00000162324 573 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm6717-201ENSMUST00000185549 838 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm29197-201ENSMUST00000185922 702 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm7560-201ENSMUST00000187748 873 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm28864-201ENSMUST00000189251 644 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm43287-201ENSMUST00000197747 600 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 Gm9689-201ENSMUST00000210009 428 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 AC153845.1-201ENSMUST00000213596 428 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 AC116460.1-201ENSMUST00000219040 313 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 AC154687.1-201ENSMUST00000224875 677 ntBASIC7.73□□□□□ -1.17
Pcdhb7Q8CDY9 AC122858.1-201ENSMUST00000226212 433 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms