Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm12131-201ENSMUST00000117479 359 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm14331-201ENSMUST00000120396 409 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm11321-201ENSMUST00000121257 902 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Mir1932-201ENSMUST00000157390 90 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm20702-201ENSMUST00000176181 460 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Ighv5-5-201ENSMUST00000193826 329 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm45478-201ENSMUST00000209472 211 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim47Q8C0E3 Gm37995-201ENSMUST00000194958 1714 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm25422-201ENSMUST00000104219 129 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm26016-201ENSMUST00000104403 129 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm15422-201ENSMUST00000117453 541 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm23981-201ENSMUST00000157136 106 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm22604-201ENSMUST00000157604 311 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm24225-201ENSMUST00000158825 98 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm18501-201ENSMUST00000185363 664 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Trbv24-201ENSMUST00000194614 347 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm18702-201ENSMUST00000196923 588 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm44718-201ENSMUST00000206886 359 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms