Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Usp47Q8BY87 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Usp47Q8BY87 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC8.82□□□□□ -1
Usp47Q8BY87 Gm9521-201ENSMUST00000206656 1516 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 AC022775.1-201ENSMUST00000228163 2698 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Usp47Q8BY87 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC8.82□□□□□ -1
Usp47Q8BY87 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Usp47Q8BY87 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Gm14805-201ENSMUST00000120172 340 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 Gm14712-201ENSMUST00000120195 772 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 Gm24359-201ENSMUST00000158418 221 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 Gm16557-201ENSMUST00000159182 191 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC8.82□□□□□ -1
Usp47Q8BY87 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC8.82□□□□□ -1
Usp47Q8BY87 Gm29519-201ENSMUST00000186994 398 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Gm37774-201ENSMUST00000194401 245 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 Gm44312-201ENSMUST00000203536 469 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC8.82□□□□□ -1
Usp47Q8BY87 Gm45734-201ENSMUST00000211916 411 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 AC112680.2-201ENSMUST00000213119 595 ntBASIC8.82□□□□□ -1
Usp47Q8BY87 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC8.82□□□□□ -1
Usp47Q8BY87 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC8.82□□□□□ -1
Usp47Q8BY87 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Usp47Q8BY87 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC8.82□□□□□ -1
Usp47Q8BY87 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp47Q8BY87 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm10650-202ENSMUST00000196581 1969 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp47Q8BY87 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC8.81□□□□□ -1
Usp47Q8BY87 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm25415-201ENSMUST00000104220 132 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm24081-201ENSMUST00000175177 125 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm6055-201ENSMUST00000180532 378 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp47Q8BY87 Mir7653-201ENSMUST00000184358 61 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm8367-201ENSMUST00000186145 887 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm38097-201ENSMUST00000192936 439 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 Gm43744-201ENSMUST00000196387 688 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 Gm44251-201ENSMUST00000204963 442 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 Gm9088-201ENSMUST00000220237 508 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 AC172989.1-201ENSMUST00000226387 513 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 AC129537.1-201ENSMUST00000226596 1228 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 AC154718.1-201ENSMUST00000226676 250 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm24200-201ENSMUST00000082955 157 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp47Q8BY87 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC8.81□□□□□ -1
Usp47Q8BY87 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Usp47Q8BY87 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp47Q8BY87 Gm4994-201ENSMUST00000118379 2187 ntBASIC8.81□□□□□ -1
Usp47Q8BY87 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp47Q8BY87 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.8□□□□□ -1
Usp47Q8BY87 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usp47Q8BY87 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC8.8□□□□□ -1
Usp47Q8BY87 Gm37735-201ENSMUST00000193995 1406 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Usp47Q8BY87 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Usp47Q8BY87 Gm10062-201ENSMUST00000072180 1470 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Usp47Q8BY87 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Usp47Q8BY87 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usp47Q8BY87 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC8.8□□□□□ -1
Usp47Q8BY87 Gm7146-201ENSMUST00000116079 739 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Usp47Q8BY87 Gm15186-201ENSMUST00000119345 563 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Usp47Q8BY87 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC8.8□□□□□ -1
Usp47Q8BY87 Gm3076-201ENSMUST00000161613 451 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.8□□□□□ -1
Usp47Q8BY87 Gm27210-201ENSMUST00000184263 402 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Mir6952-201ENSMUST00000185092 61 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Gm29240-201ENSMUST00000187248 286 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Igkv12-67-201ENSMUST00000197806 354 ntBASIC8.8□□□□□ -1
Usp47Q8BY87 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC8.8□□□□□ -1
Usp47Q8BY87 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Usp47Q8BY87 Gm19033-201ENSMUST00000208516 964 ntBASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms