Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm22426-201ENSMUST00000103811 96 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm15094-201ENSMUST00000118394 1131 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm8421-201ENSMUST00000119439 305 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm15390-201ENSMUST00000120323 738 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm16428-201ENSMUST00000121193 723 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm11385-201ENSMUST00000121513 570 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm14979-201ENSMUST00000121561 1035 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm12770-201ENSMUST00000121734 462 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm12368-201ENSMUST00000122251 434 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm23228-201ENSMUST00000157296 270 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm22262-201ENSMUST00000158713 86 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm26455-201ENSMUST00000175300 92 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm19815-201ENSMUST00000175818 335 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm26092-201ENSMUST00000179798 97 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Mir669a-1-201ENSMUST00000180238 97 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm8004-201ENSMUST00000187782 617 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm42584-201ENSMUST00000201404 220 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm18877-201ENSMUST00000207706 539 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm4548-201ENSMUST00000208487 509 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm7419-201ENSMUST00000209962 925 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 AC153541.1-201ENSMUST00000213786 294 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm6362-201ENSMUST00000217686 836 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 AC138604.2-201ENSMUST00000226620 921 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm20302-201ENSMUST00000080671 275 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 n-R5s196-201ENSMUST00000083136 117 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm22444-201ENSMUST00000093693 108 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm37663-201ENSMUST00000191887 2299 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm37109-201ENSMUST00000195475 2254 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm45322-201ENSMUST00000211642 1361 ntBASIC7.2□□□□□ -1.26
Pcdh19Q80TF3 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm38300-201ENSMUST00000194245 1870 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 AC102431.1-201ENSMUST00000223773 1449 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm37140-201ENSMUST00000192914 1684 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm38099-201ENSMUST00000193280 3170 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm37569-201ENSMUST00000192111 1722 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm43254-201ENSMUST00000199187 2491 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm37470-201ENSMUST00000193378 2798 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm15739-201ENSMUST00000118049 872 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm13486-201ENSMUST00000119910 282 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm15763-201ENSMUST00000120136 403 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm14360-201ENSMUST00000120670 393 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm14990-201ENSMUST00000122354 445 ntBASIC7.19□□□□□ -1.26
Pcdh19Q80TF3 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms