Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
ClpbQ60649 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Gm8722-201ENSMUST00000121466 769 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Gm8089-201ENSMUST00000122463 968 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.23□□□□□ -1.41
ClpbQ60649 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC6.23□□□□□ -1.41
ClpbQ60649 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Gm26381-201ENSMUST00000174895 92 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Gm20691-201ENSMUST00000176889 333 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.23□□□□□ -1.41
ClpbQ60649 Gm27601-201ENSMUST00000184794 127 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.23□□□□□ -1.41
ClpbQ60649 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.23□□□□□ -1.41
ClpbQ60649 Gm29160-201ENSMUST00000190094 699 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Gm2229-201ENSMUST00000193328 710 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.23□□□□□ -1.41
ClpbQ60649 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC6.23□□□□□ -1.41
ClpbQ60649 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 Gm5928-201ENSMUST00000221839 466 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Gm35619-201ENSMUST00000222548 600 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ClpbQ60649 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ClpbQ60649 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ClpbQ60649 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.23□□□□□ -1.41
ClpbQ60649 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
ClpbQ60649 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ClpbQ60649 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ClpbQ60649 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.23□□□□□ -1.41
ClpbQ60649 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm22267-201ENSMUST00000104008 131 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Gm24790-201ENSMUST00000104285 132 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm13357-201ENSMUST00000120528 537 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.22□□□□□ -1.41
ClpbQ60649 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
ClpbQ60649 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm27762-201ENSMUST00000183417 109 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Gm27158-201ENSMUST00000183813 238 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Gm28023-201ENSMUST00000184556 60 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Gm27825-201ENSMUST00000184586 60 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Gm27970-201ENSMUST00000184854 407 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Gm29663-201ENSMUST00000186962 853 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Gm37614-201ENSMUST00000195645 210 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Gm44849-201ENSMUST00000207595 484 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm32983-201ENSMUST00000208500 505 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
ClpbQ60649 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm17997-201ENSMUST00000211801 840 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm4556-201ENSMUST00000217808 355 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.22□□□□□ -1.41
ClpbQ60649 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Prl7a1-203ENSMUST00000224852 1283 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm5436-201ENSMUST00000058103 643 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm15500-201ENSMUST00000071523 894 ntBASIC6.22□□□□□ -1.41
ClpbQ60649 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
ClpbQ60649 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms