Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm26509-201ENSMUST00000180947 948 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm28846-201ENSMUST00000189161 368 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm44411-201ENSMUST00000204172 349 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm7557-201ENSMUST00000221935 865 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim43aQ3TL54 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm12468-201ENSMUST00000116189 404 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm5166-201ENSMUST00000121332 573 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm3810-201ENSMUST00000122413 476 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm38030-201ENSMUST00000192376 475 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm17895-201ENSMUST00000194028 874 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm21461-201ENSMUST00000200382 863 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm7452-201ENSMUST00000200764 788 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm32983-201ENSMUST00000208500 505 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Trim43aQ3TL54 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms