Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 AC163664.1-201ENSMUST00000226251 1248 ntBASIC7.09□□□□□ -1.27
Sox9Q04887 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox9Q04887 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Sox9Q04887 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Sox9Q04887 Gm20302-201ENSMUST00000080671 275 ntBASIC7.09□□□□□ -1.27
Sox9Q04887 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC7.09□□□□□ -1.27
Sox9Q04887 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox9Q04887 Gm9408-201ENSMUST00000197375 1505 ntBASIC7.09□□□□□ -1.27
Sox9Q04887 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Sox9Q04887 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Sox9Q04887 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox9Q04887 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox9Q04887 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox9Q04887 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox9Q04887 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.09□□□□□ -1.27
Sox9Q04887 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Sox9Q04887 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Sox9Q04887 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Sox9Q04887 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Sox9Q04887 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Sox9Q04887 Rnu11-201ENSMUST00000104135 134 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Gm24473-201ENSMUST00000104483 131 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Gm6181-201ENSMUST00000117187 264 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Mir6361-201ENSMUST00000185079 101 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Gm29513-201ENSMUST00000185741 202 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Gm29492-201ENSMUST00000187124 457 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Gm28917-201ENSMUST00000187294 237 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Gm29470-201ENSMUST00000188007 696 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Gm19214-201ENSMUST00000191956 1083 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC7.08□□□□□ -1.28
Sox9Q04887 Gm6056-201ENSMUST00000221253 488 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sox9Q04887 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sox9Q04887 Olfr467-201ENSMUST00000084756 927 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sox9Q04887 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox9Q04887 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox9Q04887 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.08□□□□□ -1.28
Sox9Q04887 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm9314-201ENSMUST00000199881 1528 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Mir466j-201ENSMUST00000116876 122 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Gm14554-201ENSMUST00000119548 661 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Gm9208-201ENSMUST00000120468 948 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Gm11343-201ENSMUST00000120579 599 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm26355-201ENSMUST00000158220 105 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.07□□□□□ -1.28
Sox9Q04887 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm29664-201ENSMUST00000191125 463 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms