Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm22847-201ENSMUST00000157707 105 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Samd15-201ENSMUST00000169669 1194 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Mir7037-201ENSMUST00000184414 65 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm28416-201ENSMUST00000188334 292 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm29600-201ENSMUST00000188687 377 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm28211-201ENSMUST00000190920 315 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm18445-201ENSMUST00000195502 774 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm43810-201ENSMUST00000201018 232 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm18452-201ENSMUST00000202968 1111 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 AC152979.4-201ENSMUST00000219893 379 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 AC211878.5-201ENSMUST00000221697 409 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 AC166358.6-201ENSMUST00000221834 1206 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col8a1Q00780 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Mir106b-201ENSMUST00000083580 82 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Mir425-201ENSMUST00000083645 85 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.09□□□□□ -1.43
Col8a1Q00780 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col8a1Q00780 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col8a1Q00780 Gm43681-201ENSMUST00000201581 1903 ntBASIC6.09□□□□□ -1.44
Col8a1Q00780 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Col8a1Q00780 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Col8a1Q00780 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.09□□□□□ -1.44
Col8a1Q00780 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.09□□□□□ -1.44
Col8a1Q00780 Gm44165-201ENSMUST00000203093 1469 ntBASIC6.09□□□□□ -1.44
Col8a1Q00780 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Col8a1Q00780 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Col8a1Q00780 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm42490-201ENSMUST00000198595 2064 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Fbxw23-202ENSMUST00000198480 1388 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Col8a1Q00780 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm26340-201ENSMUST00000102365 99 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm14891-201ENSMUST00000117378 596 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm7206-201ENSMUST00000117730 508 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm15349-201ENSMUST00000121154 204 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm22895-201ENSMUST00000157508 308 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm22555-201ENSMUST00000157801 62 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm24960-201ENSMUST00000157923 90 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm25433-201ENSMUST00000158283 286 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm16557-201ENSMUST00000159182 191 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms