Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CiitaP79621 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
CiitaP79621 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CiitaP79621 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.94□□□□□ -1.3
CiitaP79621 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
CiitaP79621 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CiitaP79621 Gm12307-201ENSMUST00000120581 590 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Mir1903-201ENSMUST00000122574 80 ntBASIC6.94□□□□□ -1.3
CiitaP79621 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.94□□□□□ -1.3
CiitaP79621 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC6.94□□□□□ -1.3
CiitaP79621 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.94□□□□□ -1.3
CiitaP79621 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.94□□□□□ -1.3
CiitaP79621 Gm23386-201ENSMUST00000158585 144 ntBASIC6.94□□□□□ -1.3
CiitaP79621 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.94□□□□□ -1.3
CiitaP79621 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CiitaP79621 Gm10410-201ENSMUST00000180138 384 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Gm26898-201ENSMUST00000181678 384 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Mir6921-201ENSMUST00000183719 80 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Gm28527-201ENSMUST00000185210 297 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.94□□□□□ -1.3
CiitaP79621 Gm412-201ENSMUST00000193360 948 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Gm4332-201ENSMUST00000196114 346 ntBASIC6.94□□□□□ -1.3
CiitaP79621 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.94□□□□□ -1.3
CiitaP79621 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC6.94□□□□□ -1.3
CiitaP79621 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.94□□□□□ -1.3
CiitaP79621 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.94□□□□□ -1.3
CiitaP79621 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CiitaP79621 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CiitaP79621 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.94□□□□□ -1.3
CiitaP79621 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CiitaP79621 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.93□□□□□ -1.3
CiitaP79621 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CiitaP79621 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CiitaP79621 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Gm12643-201ENSMUST00000116078 374 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Gm12874-201ENSMUST00000117190 913 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Gm12937-201ENSMUST00000118333 448 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Gm15501-202ENSMUST00000140687 625 ntBASIC6.93□□□□□ -1.3
CiitaP79621 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.93□□□□□ -1.3
CiitaP79621 Gm17048-201ENSMUST00000179266 847 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.93□□□□□ -1.3
CiitaP79621 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.93□□□□□ -1.3
CiitaP79621 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.93□□□□□ -1.3
CiitaP79621 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.93□□□□□ -1.3
CiitaP79621 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.93□□□□□ -1.3
CiitaP79621 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.93□□□□□ -1.3
CiitaP79621 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CiitaP79621 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.93□□□□□ -1.3
CiitaP79621 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.93□□□□□ -1.3
CiitaP79621 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
CiitaP79621 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Gm18789-201ENSMUST00000216115 550 ntBASIC6.93□□□□□ -1.3
CiitaP79621 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.93□□□□□ -1.3
CiitaP79621 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.93□□□□□ -1.3
CiitaP79621 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.93□□□□□ -1.3
CiitaP79621 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CiitaP79621 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CiitaP79621 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CiitaP79621 Mir3068-201ENSMUST00000083004 136 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.93□□□□□ -1.3
CiitaP79621 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CiitaP79621 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CiitaP79621 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CiitaP79621 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms