Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Sox3P53784 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sox3P53784 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sox3P53784 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sox3P53784 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.14□□□□□ -1.43
Sox3P53784 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 Gm15078-201ENSMUST00000118371 782 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm12262-201ENSMUST00000119915 305 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm11581-201ENSMUST00000122024 763 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm25550-201ENSMUST00000158079 128 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm16139-201ENSMUST00000160015 420 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox3P53784 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox3P53784 Gm22917-201ENSMUST00000180116 110 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox3P53784 Mir6337-201ENSMUST00000184194 105 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm29470-201ENSMUST00000188007 696 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm8581-201ENSMUST00000188636 890 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox3P53784 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 Gm19185-201ENSMUST00000196365 643 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm44213-201ENSMUST00000204977 703 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sox3P53784 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox3P53784 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.14□□□□□ -1.43
Sox3P53784 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox3P53784 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sox3P53784 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sox3P53784 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sox3P53784 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.14□□□□□ -1.43
Sox3P53784 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.14□□□□□ -1.43
Sox3P53784 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.13□□□□□ -1.43
Sox3P53784 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm13983-201ENSMUST00000118018 865 ntBASIC6.13□□□□□ -1.43
Sox3P53784 Gm12565-201ENSMUST00000119004 649 ntBASIC6.13□□□□□ -1.43
Sox3P53784 Gm13462-201ENSMUST00000121472 961 ntBASIC6.13□□□□□ -1.43
Sox3P53784 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox3P53784 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm21392-201ENSMUST00000182950 972 ntBASIC6.13□□□□□ -1.43
Sox3P53784 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm43160-201ENSMUST00000196453 421 ntBASIC6.13□□□□□ -1.43
Sox3P53784 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.13□□□□□ -1.43
Sox3P53784 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.13□□□□□ -1.43
Sox3P53784 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Gm44795-201ENSMUST00000205496 319 ntBASIC6.13□□□□□ -1.43
Sox3P53784 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox3P53784 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm3266-201ENSMUST00000217832 591 ntBASIC6.13□□□□□ -1.43
Sox3P53784 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.13□□□□□ -1.43
Sox3P53784 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.13□□□□□ -1.43
Sox3P53784 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox3P53784 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Sox3P53784 Mir298-201ENSMUST00000083476 82 ntBASIC6.13□□□□□ -1.43
Sox3P53784 Gm7731-201ENSMUST00000091759 470 ntBASIC6.13□□□□□ -1.43
Sox3P53784 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox3P53784 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.13□□□□□ -1.43
Sox3P53784 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms