Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm11370-201ENSMUST00000120583 260 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm14489-201ENSMUST00000120868 901 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm12321-201ENSMUST00000121485 804 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm14990-201ENSMUST00000122354 445 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm23426-201ENSMUST00000122483 318 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm16357-201ENSMUST00000144091 474 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Gm25722-201ENSMUST00000157498 279 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm22533-201ENSMUST00000158821 274 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm20549-201ENSMUST00000174804 429 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC7.05□□□□□ -1.28
Usp4P35123 Gm29474-201ENSMUST00000187688 379 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm28396-201ENSMUST00000190309 379 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm7412-201ENSMUST00000191692 605 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.05□□□□□ -1.28
Usp4P35123 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.05□□□□□ -1.28
Usp4P35123 Gm29815-201ENSMUST00000202418 178 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm42883-201ENSMUST00000202594 222 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Gm44971-201ENSMUST00000206192 337 ntBASIC7.05□□□□□ -1.28
Usp4P35123 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC7.05□□□□□ -1.28
Usp4P35123 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC7.05□□□□□ -1.28
Usp4P35123 AC151904.5-201ENSMUST00000218975 549 ntBASIC7.05□□□□□ -1.28
Usp4P35123 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.05□□□□□ -1.28
Usp4P35123 AC132918.1-201ENSMUST00000227877 925 ntBASIC7.05□□□□□ -1.28
Usp4P35123 AC098742.1-201ENSMUST00000227945 373 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp4P35123 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp4P35123 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp4P35123 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp4P35123 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.05□□□□□ -1.28
Usp4P35123 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.05□□□□□ -1.28
Usp4P35123 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp4P35123 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp4P35123 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.04□□□□□ -1.28
Usp4P35123 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.04□□□□□ -1.28
Usp4P35123 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Gm27013-202ENSMUST00000205067 1436 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Gm26419-201ENSMUST00000104272 133 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Gm13732-201ENSMUST00000117753 535 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm14755-201ENSMUST00000118037 384 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm6067-201ENSMUST00000121648 491 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm23888-201ENSMUST00000122690 253 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.04□□□□□ -1.28
Usp4P35123 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.04□□□□□ -1.28
Usp4P35123 Gm23082-201ENSMUST00000157852 133 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Gm16102-201ENSMUST00000160955 420 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp4P35123 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC7.04□□□□□ -1.28
Usp4P35123 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Gm28503-201ENSMUST00000185966 147 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Gm43436-201ENSMUST00000199308 147 ntBASIC7.04□□□□□ -1.28
Usp4P35123 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp4P35123 Gm44688-201ENSMUST00000209083 537 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Gm18781-201ENSMUST00000211252 924 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm17950-201ENSMUST00000214617 646 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms