Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm22562-201ENSMUST00000157334 111 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Mir1945-201ENSMUST00000157919 78 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.04□□□□□ -1.6
Sdc1P18828 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm44451-201ENSMUST00000203767 483 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Gm18247-201ENSMUST00000222937 601 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sdc1P18828 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sdc1P18828 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.04□□□□□ -1.6
Sdc1P18828 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc1P18828 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Gm11558-201ENSMUST00000118454 459 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Gm14716-201ENSMUST00000120138 718 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Sdc1P18828 Gm12804-201ENSMUST00000121030 999 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.03□□□□□ -1.6
Sdc1P18828 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 Gm20432-201ENSMUST00000173716 250 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.03□□□□□ -1.6
Sdc1P18828 Mir6415-201ENSMUST00000184064 100 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Gm27178-201ENSMUST00000184962 340 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Gm28918-201ENSMUST00000188822 699 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Gm37678-201ENSMUST00000192908 1146 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.03□□□□□ -1.6
Sdc1P18828 Gm7478-201ENSMUST00000201054 581 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 Gm45198-201ENSMUST00000206796 591 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC5.03□□□□□ -1.6
Sdc1P18828 Mif-ps7-201ENSMUST00000223357 327 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Zfp874a-208ENSMUST00000225479 1092 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Gm5815-201ENSMUST00000050706 1185 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Sdc1P18828 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Sdc1P18828 Mir296-201ENSMUST00000083587 79 ntBASIC5.03□□□□□ -1.6
Sdc1P18828 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Sdc1P18828 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc1P18828 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Sdc1P18828 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms