Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC6.3□□□□□ -1.4
Hoxd3P09027 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxd3P09027 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxd3P09027 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxd3P09027 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Hoxd3P09027 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxd3P09027 Gm37465-201ENSMUST00000192845 3290 ntBASIC6.3□□□□□ -1.4
Hoxd3P09027 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxd3P09027 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm37978-201ENSMUST00000194736 2915 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 AC122346.1-202ENSMUST00000225586 2116 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm37139-201ENSMUST00000192134 4419 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm38130-201ENSMUST00000194311 1761 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Mir759-201ENSMUST00000103254 98 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm24257-201ENSMUST00000104472 131 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm14897-201ENSMUST00000118213 207 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm14172-201ENSMUST00000118255 644 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm11997-201ENSMUST00000118697 313 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm13358-201ENSMUST00000121427 569 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm26184-201ENSMUST00000157686 131 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm25669-201ENSMUST00000157699 112 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm2343-201ENSMUST00000161177 1042 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm17138-201ENSMUST00000165702 459 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm17097-201ENSMUST00000166414 714 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hoxd3P09027 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm29548-201ENSMUST00000187012 694 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm28105-201ENSMUST00000187788 694 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm28546-201ENSMUST00000188221 615 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm29605-201ENSMUST00000190800 292 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm29739-201ENSMUST00000191760 529 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm43071-201ENSMUST00000197233 2032 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm7478-201ENSMUST00000201054 581 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm44149-201ENSMUST00000204256 226 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm20734-201ENSMUST00000216939 193 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm19599-201ENSMUST00000218898 358 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 AC120540.1-201ENSMUST00000221879 324 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.29□□□□□ -1.4
Hoxd3P09027 AC151982.1-201ENSMUST00000223546 464 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 AC154506.1-201ENSMUST00000225178 621 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 AC154249.1-201ENSMUST00000226296 320 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 AC120375.2-201ENSMUST00000226532 1853 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Ptchd1-201ENSMUST00000038665 2768 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Mir185-201ENSMUST00000083530 65 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm5614-201ENSMUST00000091097 318 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC6.29□□□□□ -1.4
Hoxd3P09027 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.29□□□□□ -1.4
Hoxd3P09027 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxd3P09027 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hoxd3P09027 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms