Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CopeO89079 Mir6362-201ENSMUST00000184329 107 ntBASIC6.35□□□□□ -1.39
CopeO89079 Gm29605-201ENSMUST00000190800 292 ntBASIC6.35□□□□□ -1.39
CopeO89079 Gm43048-201ENSMUST00000196101 388 ntBASIC6.35□□□□□ -1.39
CopeO89079 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CopeO89079 Gm9504-201ENSMUST00000196322 468 ntBASIC6.35□□□□□ -1.39
CopeO89079 Gm43390-201ENSMUST00000196614 421 ntBASIC6.35□□□□□ -1.39
CopeO89079 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.35□□□□□ -1.39
CopeO89079 Gm44075-201ENSMUST00000204208 216 ntBASIC6.35□□□□□ -1.39
CopeO89079 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.35□□□□□ -1.39
CopeO89079 Gm44112-201ENSMUST00000204787 372 ntBASIC6.35□□□□□ -1.39
CopeO89079 Gm9652-201ENSMUST00000209345 163 ntBASIC6.35□□□□□ -1.39
CopeO89079 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.35□□□□□ -1.39
CopeO89079 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.35□□□□□ -1.39
CopeO89079 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.35□□□□□ -1.39
CopeO89079 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CopeO89079 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CopeO89079 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CopeO89079 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CopeO89079 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CopeO89079 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CopeO89079 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CopeO89079 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CopeO89079 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CopeO89079 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CopeO89079 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CopeO89079 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CopeO89079 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.34□□□□□ -1.39
CopeO89079 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CopeO89079 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CopeO89079 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CopeO89079 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CopeO89079 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.34□□□□□ -1.39
CopeO89079 Gm14098-201ENSMUST00000119295 623 ntBASIC6.34□□□□□ -1.39
CopeO89079 Gm6987-201ENSMUST00000119319 428 ntBASIC6.34□□□□□ -1.39
CopeO89079 Gm13818-201ENSMUST00000119441 511 ntBASIC6.34□□□□□ -1.39
CopeO89079 Gm14998-201ENSMUST00000120502 495 ntBASIC6.34□□□□□ -1.39
CopeO89079 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.34□□□□□ -1.39
CopeO89079 Defa-ps10-201ENSMUST00000121649 171 ntBASIC6.34□□□□□ -1.39
CopeO89079 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.34□□□□□ -1.39
CopeO89079 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.34□□□□□ -1.39
CopeO89079 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
CopeO89079 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CopeO89079 Gm27193-201ENSMUST00000184217 586 ntBASIC6.34□□□□□ -1.39
CopeO89079 Gm8009-201ENSMUST00000191672 436 ntBASIC6.34□□□□□ -1.39
CopeO89079 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Gm36378-201ENSMUST00000201709 388 ntBASIC6.34□□□□□ -1.39
CopeO89079 Gm44896-201ENSMUST00000206190 772 ntBASIC6.34□□□□□ -1.39
CopeO89079 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.34□□□□□ -1.39
CopeO89079 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.34□□□□□ -1.39
CopeO89079 Gm4556-201ENSMUST00000217808 355 ntBASIC6.34□□□□□ -1.39
CopeO89079 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CopeO89079 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.34□□□□□ -1.39
CopeO89079 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Gm5928-201ENSMUST00000221839 466 ntBASIC6.34□□□□□ -1.39
CopeO89079 Gm18940-201ENSMUST00000222518 871 ntBASIC6.34□□□□□ -1.39
CopeO89079 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.34□□□□□ -1.39
CopeO89079 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.34□□□□□ -1.39
CopeO89079 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.34□□□□□ -1.39
CopeO89079 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CopeO89079 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CopeO89079 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.34□□□□□ -1.39
CopeO89079 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.34□□□□□ -1.39
CopeO89079 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
CopeO89079 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CopeO89079 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.34□□□□□ -1.39
CopeO89079 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CopeO89079 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.33□□□□□ -1.4
CopeO89079 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.33□□□□□ -1.4
CopeO89079 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CopeO89079 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.33□□□□□ -1.4
CopeO89079 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CopeO89079 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CopeO89079 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.33□□□□□ -1.4
CopeO89079 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CopeO89079 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.33□□□□□ -1.4
CopeO89079 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CopeO89079 Gm12399-201ENSMUST00000121475 446 ntBASIC6.33□□□□□ -1.4
CopeO89079 Gm12929-201ENSMUST00000122406 370 ntBASIC6.33□□□□□ -1.4
CopeO89079 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.33□□□□□ -1.4
CopeO89079 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.33□□□□□ -1.4
CopeO89079 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CopeO89079 Gm23894-201ENSMUST00000158107 313 ntBASIC6.33□□□□□ -1.4
CopeO89079 Gm23343-201ENSMUST00000158964 143 ntBASIC6.33□□□□□ -1.4
CopeO89079 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CopeO89079 Gm23968-201ENSMUST00000175047 125 ntBASIC6.33□□□□□ -1.4
CopeO89079 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.33□□□□□ -1.4
CopeO89079 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CopeO89079 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms