Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cldn3Q9Z0G9 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cldn3Q9Z0G9 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cldn3Q9Z0G9 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.4□□□□□ -1.39
Cldn3Q9Z0G9 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cldn3Q9Z0G9 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
Cldn3Q9Z0G9 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm13768-201ENSMUST00000116469 929 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm15901-201ENSMUST00000117663 941 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm8855-201ENSMUST00000118888 878 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm15164-201ENSMUST00000122203 271 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Mir1953-201ENSMUST00000157866 89 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm23894-201ENSMUST00000158107 313 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm4152-201ENSMUST00000172675 259 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm43084-201ENSMUST00000200696 947 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm18805-201ENSMUST00000206872 655 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm18620-201ENSMUST00000222295 324 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cldn3Q9Z0G9 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm14356-201ENSMUST00000118322 869 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm12040-201ENSMUST00000118357 537 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm8312-201ENSMUST00000119380 618 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm22276-201ENSMUST00000122469 129 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm24735-201ENSMUST00000158859 118 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm8550-201ENSMUST00000161621 653 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm37511-201ENSMUST00000192901 294 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm38291-201ENSMUST00000193671 259 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm7557-201ENSMUST00000221935 865 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.38□□□□□ -1.39
Cldn3Q9Z0G9 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms