Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
U2af1Q9D883 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
U2af1Q9D883 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
U2af1Q9D883 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
U2af1Q9D883 Gm6990-201ENSMUST00000086830 348 ntBASIC8.34□□□□□ -1.07
U2af1Q9D883 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
U2af1Q9D883 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
U2af1Q9D883 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
U2af1Q9D883 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
U2af1Q9D883 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.34□□□□□ -1.07
U2af1Q9D883 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
U2af1Q9D883 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
U2af1Q9D883 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
U2af1Q9D883 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
U2af1Q9D883 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.08
U2af1Q9D883 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
U2af1Q9D883 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
U2af1Q9D883 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Ap5m1-208ENSMUST00000228238 3514 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC8.33□□□□□ -1.08
U2af1Q9D883 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
U2af1Q9D883 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm44045-201ENSMUST00000204906 2520 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
U2af1Q9D883 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm22374-201ENSMUST00000104583 132 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm14356-201ENSMUST00000118322 869 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm15616-201ENSMUST00000118662 375 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm11879-201ENSMUST00000121885 702 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm20620-201ENSMUST00000177528 168 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm5947-201ENSMUST00000179156 714 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm5645-201ENSMUST00000179597 714 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm37511-201ENSMUST00000192901 294 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
U2af1Q9D883 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm18290-201ENSMUST00000202900 844 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
U2af1Q9D883 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gm22684-201ENSMUST00000082849 132 ntBASIC8.33□□□□□ -1.08
U2af1Q9D883 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
U2af1Q9D883 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
U2af1Q9D883 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
U2af1Q9D883 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
U2af1Q9D883 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
U2af1Q9D883 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
U2af1Q9D883 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
U2af1Q9D883 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
U2af1Q9D883 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
U2af1Q9D883 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
U2af1Q9D883 Mir678-201ENSMUST00000102114 84 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
U2af1Q9D883 Gm12040-201ENSMUST00000118357 537 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC8.32□□□□□ -1.08
U2af1Q9D883 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Gm23386-201ENSMUST00000158585 144 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 Mir7082-201ENSMUST00000183526 92 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 Gm44770-201ENSMUST00000205395 1264 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Gm45259-201ENSMUST00000209217 1006 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
U2af1Q9D883 AC140930.1-201ENSMUST00000221889 389 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 AC154795.1-201ENSMUST00000225611 364 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 AC131029.2-201ENSMUST00000226696 628 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Gm23238-201ENSMUST00000083007 164 ntBASIC8.32□□□□□ -1.08
U2af1Q9D883 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
U2af1Q9D883 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
U2af1Q9D883 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms