Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm42671-201ENSMUST00000198013 1604 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm24257-201ENSMUST00000104472 131 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm13739-201ENSMUST00000118020 530 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm6427-201ENSMUST00000118721 979 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm14202-201ENSMUST00000120121 311 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm14883-201ENSMUST00000120179 157 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm11343-201ENSMUST00000120579 599 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm11895-201ENSMUST00000122165 467 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm3221-201ENSMUST00000164869 440 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm17177-201ENSMUST00000169144 483 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm18417-201ENSMUST00000176564 648 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm5252-201ENSMUST00000189030 909 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm6750-201ENSMUST00000189273 268 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm28586-201ENSMUST00000189857 456 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm43007-201ENSMUST00000197618 291 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm43171-201ENSMUST00000199882 291 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm2961-201ENSMUST00000211074 772 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm17875-201ENSMUST00000216005 941 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm6989-201ENSMUST00000218409 654 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 AC161252.2-201ENSMUST00000224978 374 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 AC122877.1-201ENSMUST00000228873 218 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 4930553J12Rik-201ENSMUST00000023648 381 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm6807-201ENSMUST00000077435 888 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Mir465-201ENSMUST00000093563 74 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim42Q9D2H5 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Gm19176-201ENSMUST00000222149 1831 ntBASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Gm37661-201ENSMUST00000191863 1550 ntBASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim42Q9D2H5 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms