Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Trim8Q99PJ2 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim8Q99PJ2 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Mir760-201ENSMUST00000103257 119 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm11865-201ENSMUST00000118093 859 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm13196-201ENSMUST00000118297 379 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm12331-201ENSMUST00000119927 622 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm15596-201ENSMUST00000121139 784 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm13237-201ENSMUST00000122151 635 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm17075-201ENSMUST00000171924 670 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm20574-201ENSMUST00000182867 917 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm21728-201ENSMUST00000188442 695 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm21889-201ENSMUST00000188487 695 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm20932-201ENSMUST00000189115 694 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm21920-201ENSMUST00000190042 695 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm44137-201ENSMUST00000203670 367 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm44931-201ENSMUST00000206056 545 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm44830-201ENSMUST00000207667 584 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim8Q99PJ2 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim8Q99PJ2 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms