Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm1Q8VC85 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm25396-201ENSMUST00000103981 133 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm24989-201ENSMUST00000104461 88 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm23527-201ENSMUST00000104570 130 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm13311-201ENSMUST00000117863 379 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm11517-201ENSMUST00000119491 387 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm26321-201ENSMUST00000157740 242 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm25550-201ENSMUST00000158079 128 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm24359-201ENSMUST00000158418 221 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Mir7685-201ENSMUST00000183555 62 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm37770-201ENSMUST00000192855 772 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm37477-201ENSMUST00000195215 884 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm43576-201ENSMUST00000197937 871 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm5027-201ENSMUST00000206700 375 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm9321-201ENSMUST00000221179 778 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm5928-201ENSMUST00000221839 466 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Mir425-201ENSMUST00000083645 85 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm1Q8VC85 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
Lsm1Q8VC85 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
Lsm1Q8VC85 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.09□□□□□ -1.44
Lsm1Q8VC85 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.09□□□□□ -1.44
Lsm1Q8VC85 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.44
Lsm1Q8VC85 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Lsm1Q8VC85 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Lsm1Q8VC85 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm11920-201ENSMUST00000118491 563 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm12115-201ENSMUST00000119969 447 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm12535-201ENSMUST00000121025 484 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm6489-201ENSMUST00000178167 696 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm27186-201ENSMUST00000184223 307 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm27617-201ENSMUST00000184321 168 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Mir6972-201ENSMUST00000184774 64 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm8860-201ENSMUST00000193160 445 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm2229-201ENSMUST00000193328 710 ntBASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.08□□□□□ -1.44
Lsm1Q8VC85 Gm4860-201ENSMUST00000200368 454 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms