Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Snora9-201ENSMUST00000082579 133 ntBASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.62□□□□□ -1.19
Ccdc9Q8VC31 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm37456-201ENSMUST00000193176 5837 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm22470-201ENSMUST00000104117 130 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm23834-201ENSMUST00000104436 129 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm24986-201ENSMUST00000104452 132 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm13121-201ENSMUST00000120637 632 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm24647-201ENSMUST00000157112 113 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm22885-201ENSMUST00000157410 107 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm24130-201ENSMUST00000158536 151 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm27373-201ENSMUST00000184017 184 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm18254-201ENSMUST00000185699 1204 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm8506-201ENSMUST00000186661 829 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm19011-201ENSMUST00000221777 808 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 AC118006.3-201ENSMUST00000223948 1176 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 n-R5s60-201ENSMUST00000083299 119 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Gm38284-201ENSMUST00000194803 4539 ntBASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ccdc9Q8VC31 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm15054-201ENSMUST00000117393 281 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm7129-201ENSMUST00000117402 997 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm11880-201ENSMUST00000117612 399 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm13183-201ENSMUST00000118615 789 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm13604-201ENSMUST00000119332 482 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm25505-201ENSMUST00000157220 246 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm25057-201ENSMUST00000157366 88 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm22326-201ENSMUST00000158897 351 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm28142-201ENSMUST00000186899 698 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm29354-201ENSMUST00000187613 696 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm29161-201ENSMUST00000188250 699 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm17918-201ENSMUST00000205315 574 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm19196-201ENSMUST00000209258 357 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm37773-201ENSMUST00000194141 2120 ntBASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ccdc9Q8VC31 Gm44518-201ENSMUST00000208080 4370 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 AC156569.1-201ENSMUST00000222020 3841 ntBASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc9Q8VC31 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms