Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm26377-201ENSMUST00000102184 108 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm11905-201ENSMUST00000117653 678 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm11858-201ENSMUST00000117935 838 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm12287-201ENSMUST00000119770 707 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm25413-201ENSMUST00000158544 312 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm26025-201ENSMUST00000158655 271 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm22533-201ENSMUST00000158821 274 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Vis1-201ENSMUST00000183957 201 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm27755-201ENSMUST00000184623 132 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm27715-201ENSMUST00000184714 260 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm29496-201ENSMUST00000189854 693 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm37383-201ENSMUST00000191750 745 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm36932-201ENSMUST00000195226 929 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm44282-201ENSMUST00000203199 190 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm18268-201ENSMUST00000208445 943 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm46136-201ENSMUST00000214730 565 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 AC132384.13-201ENSMUST00000219556 1159 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 AC132237.2-201ENSMUST00000221702 1209 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 AC117656.3-205ENSMUST00000224606 1205 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 AC140210.1-201ENSMUST00000224961 534 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 AC154594.1-201ENSMUST00000225171 1273 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Gm5087-204ENSMUST00000225820 645 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Clrn1Q8K445 AW822073-201ENSMUST00000075305 555 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.4□□□□□ -1.38
Clrn1Q8K445 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Clrn1Q8K445 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.4□□□□□ -1.39
Clrn1Q8K445 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Clrn1Q8K445 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.4□□□□□ -1.39
Clrn1Q8K445 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Clrn1Q8K445 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.4□□□□□ -1.39
Clrn1Q8K445 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Clrn1Q8K445 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.4□□□□□ -1.39
Clrn1Q8K445 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Clrn1Q8K445 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Clrn1Q8K445 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm7910-201ENSMUST00000117896 835 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm12697-201ENSMUST00000118008 667 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm12242-201ENSMUST00000118824 738 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm14070-201ENSMUST00000120773 428 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm15316-201ENSMUST00000121082 421 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm3160-201ENSMUST00000128343 607 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm23031-201ENSMUST00000157998 119 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm16558-201ENSMUST00000163015 532 ntBASIC6.39□□□□□ -1.39
Clrn1Q8K445 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms