Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.7□□□□□ -1.18
Brf1Q8CFK2 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Brf1Q8CFK2 AC136019.1-201ENSMUST00000226503 1412 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm22710-201ENSMUST00000116892 125 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm22276-201ENSMUST00000122469 129 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 n-R5s30-201ENSMUST00000122624 122 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm23894-201ENSMUST00000158107 313 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm17063-201ENSMUST00000168135 456 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm3307-201ENSMUST00000176164 632 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm20778-201ENSMUST00000178524 627 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm43044-201ENSMUST00000198091 379 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 AC122371.2-201ENSMUST00000220583 366 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 CT030238.4-202ENSMUST00000226143 745 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Brf1Q8CFK2 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm15901-201ENSMUST00000117663 941 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm8692-201ENSMUST00000118102 438 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm21614-201ENSMUST00000183260 1005 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm43531-201ENSMUST00000200676 1114 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm9535-201ENSMUST00000218499 768 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm3213-201ENSMUST00000219296 441 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Gm19540-201ENSMUST00000221843 810 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Brf1Q8CFK2 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 171.9 ms