Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm24709-201ENSMUST00000104123 132 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm13265-201ENSMUST00000118090 421 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm14870-201ENSMUST00000118414 156 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm15501-202ENSMUST00000140687 625 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm24435-201ENSMUST00000157886 110 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm22730-201ENSMUST00000158085 171 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm25904-201ENSMUST00000158491 143 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm22523-201ENSMUST00000158696 100 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm3140-201ENSMUST00000163523 481 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm23968-201ENSMUST00000175047 125 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm27998-201ENSMUST00000184902 361 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm43576-201ENSMUST00000197937 871 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm6649-201ENSMUST00000199743 1165 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm2602-201ENSMUST00000202112 571 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm17918-201ENSMUST00000205315 574 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm44607-201ENSMUST00000205611 1090 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Vps53Q8CCB4 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm14513-201ENSMUST00000117403 123 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm13772-201ENSMUST00000118431 317 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm2986-201ENSMUST00000121603 382 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm15618-201ENSMUST00000121610 452 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm20615-201ENSMUST00000177503 705 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm25244-201ENSMUST00000178089 132 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm37857-201ENSMUST00000191784 1199 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm34768-201ENSMUST00000193884 565 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm38384-201ENSMUST00000195413 1122 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm18586-201ENSMUST00000217265 518 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 AC132433.1-201ENSMUST00000221553 1101 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms