Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Gm22952-201ENSMUST00000116720 120 ntBASIC8.85□□□□□ -0.99
Usp47Q8BY87 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Gm7189-201ENSMUST00000119811 429 ntBASIC8.85□□□□□ -0.99
Usp47Q8BY87 Gm14331-201ENSMUST00000120396 409 ntBASIC8.85□□□□□ -0.99
Usp47Q8BY87 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Mir7235-201ENSMUST00000183796 56 ntBASIC8.85□□□□□ -0.99
Usp47Q8BY87 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC8.85□□□□□ -0.99
Usp47Q8BY87 AC119894.1-201ENSMUST00000220399 350 ntBASIC8.85□□□□□ -0.99
Usp47Q8BY87 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Usp47Q8BY87 n-R5s180-201ENSMUST00000082770 106 ntBASIC8.85□□□□□ -0.99
Usp47Q8BY87 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Usp47Q8BY87 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp47Q8BY87 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Gm14510-201ENSMUST00000116165 1092 ntBASIC8.84□□□□□ -0.99
Usp47Q8BY87 Gm13811-201ENSMUST00000117800 256 ntBASIC8.84□□□□□ -0.99
Usp47Q8BY87 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC8.84□□□□□ -0.99
Usp47Q8BY87 Gm13998-201ENSMUST00000120952 335 ntBASIC8.84□□□□□ -0.99
Usp47Q8BY87 Gm7931-201ENSMUST00000121537 271 ntBASIC8.84□□□□□ -0.99
Usp47Q8BY87 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Usp47Q8BY87 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC8.84□□□□□ -0.99
Usp47Q8BY87 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Gm43501-201ENSMUST00000202513 107 ntBASIC8.84□□□□□ -0.99
Usp47Q8BY87 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC8.84□□□□□ -0.99
Usp47Q8BY87 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.84□□□□□ -0.99
Usp47Q8BY87 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.84□□□□□ -0.99
Usp47Q8BY87 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp47Q8BY87 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Usp47Q8BY87 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Usp47Q8BY87 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC8.84□□□□□ -1
Usp47Q8BY87 Gm5832-201ENSMUST00000121704 1582 ntBASIC8.84□□□□□ -1
Usp47Q8BY87 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Gm38082-201ENSMUST00000192800 6882 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Gm45786-201ENSMUST00000213021 2278 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Usp47Q8BY87 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Gm13193-201ENSMUST00000117275 225 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Gm12618-201ENSMUST00000121754 483 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Mir7020-201ENSMUST00000183787 70 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 Gm37430-201ENSMUST00000193039 196 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Gm7343-201ENSMUST00000194510 1061 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC8.83□□□□□ -1
Usp47Q8BY87 Gm18467-201ENSMUST00000208805 434 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Gm7499-201ENSMUST00000210423 813 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 AC154633.1-201ENSMUST00000223276 449 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC8.83□□□□□ -1
Usp47Q8BY87 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Gm38284-201ENSMUST00000194803 4539 ntBASIC8.83□□□□□ -1
Usp47Q8BY87 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp47Q8BY87 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usp47Q8BY87 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC8.82□□□□□ -1
Usp47Q8BY87 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Usp47Q8BY87 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 124.6 ms