Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm11876-201ENSMUST00000120002 269 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm22794-201ENSMUST00000157228 306 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm22158-201ENSMUST00000158411 126 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm24824-201ENSMUST00000175097 78 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm22392-201ENSMUST00000177971 107 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm21729-201ENSMUST00000180058 664 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm21853-201ENSMUST00000180071 664 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm11392-201ENSMUST00000181419 710 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm29495-201ENSMUST00000189319 664 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm18864-201ENSMUST00000194518 1051 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm7413-201ENSMUST00000219498 462 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm18338-201ENSMUST00000222381 560 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm5528-201ENSMUST00000076314 480 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 n-R5s60-201ENSMUST00000083299 119 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Npr3-204ENSMUST00000228489 1969 ntBASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim41Q5NCC3 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 AC123705.1-201ENSMUST00000222512 2058 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 AC121094.1-201ENSMUST00000224766 1345 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm36927-201ENSMUST00000192504 1841 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm14755-201ENSMUST00000118037 384 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm12754-201ENSMUST00000121908 454 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm24011-201ENSMUST00000157732 268 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm6055-201ENSMUST00000180532 378 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm28190-201ENSMUST00000189766 722 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm18593-201ENSMUST00000200754 1139 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm5995-201ENSMUST00000204107 1273 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 AC156504.1-201ENSMUST00000214608 157 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm18620-201ENSMUST00000222295 324 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 CT025548.1-201ENSMUST00000227459 257 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm24707-201ENSMUST00000082812 107 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm24765-201ENSMUST00000083691 103 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim41Q5NCC3 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm17170-201ENSMUST00000112785 316 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm15164-201ENSMUST00000122203 271 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm24685-201ENSMUST00000157764 285 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC12.92□□□□□ -0.34
Trim41Q5NCC3 Gm8221-201ENSMUST00000178052 564 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms