Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm18359-201ENSMUST00000173024 1459 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Rnu11-201ENSMUST00000104135 134 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm13357-201ENSMUST00000120528 537 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm12451-201ENSMUST00000121636 633 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm8648-201ENSMUST00000122457 221 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm6081-201ENSMUST00000134472 489 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm23954-201ENSMUST00000157213 353 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Mir1953-201ENSMUST00000157866 89 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Mir7046-201ENSMUST00000183435 66 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm19739-201ENSMUST00000195941 153 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm43867-201ENSMUST00000203860 525 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm45070-201ENSMUST00000208100 246 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Mir425-201ENSMUST00000083645 85 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trafd1Q3UDK1 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm11920-201ENSMUST00000118491 563 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm15164-201ENSMUST00000122203 271 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm13669-201ENSMUST00000122366 457 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm25435-201ENSMUST00000158277 267 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm23968-201ENSMUST00000175047 125 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm9285-201ENSMUST00000177691 697 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm9504-201ENSMUST00000196322 468 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm19088-201ENSMUST00000198800 566 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm9367-201ENSMUST00000205703 546 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm9685-201ENSMUST00000211275 538 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm18789-201ENSMUST00000216115 550 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trafd1Q3UDK1 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms