Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Msx2Q03358 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Msx2Q03358 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Msx2Q03358 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Msx2Q03358 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.77□□□□□ -1.32
Msx2Q03358 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.32
Msx2Q03358 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Msx2Q03358 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.77□□□□□ -1.33
Msx2Q03358 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Msx2Q03358 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Msx2Q03358 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.77□□□□□ -1.33
Msx2Q03358 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Msx2Q03358 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm4911-201ENSMUST00000119388 945 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm13038-201ENSMUST00000119886 459 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm13720-201ENSMUST00000120741 196 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm24139-201ENSMUST00000122780 288 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC6.77□□□□□ -1.33
Msx2Q03358 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm8974-201ENSMUST00000175770 479 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Msx2Q03358 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm21894-201ENSMUST00000179631 546 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC6.77□□□□□ -1.33
Msx2Q03358 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm28164-201ENSMUST00000190143 442 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm6197-201ENSMUST00000192273 454 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm37404-201ENSMUST00000195726 359 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm43238-201ENSMUST00000196463 359 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm17935-201ENSMUST00000196649 772 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm19104-201ENSMUST00000198392 679 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm18691-201ENSMUST00000203593 872 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm18207-201ENSMUST00000205486 526 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm44946-201ENSMUST00000208425 572 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.77□□□□□ -1.33
Msx2Q03358 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm22977-201ENSMUST00000082615 107 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Msx2Q03358 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Msx2Q03358 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.77□□□□□ -1.33
Msx2Q03358 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.77□□□□□ -1.33
Msx2Q03358 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.77□□□□□ -1.33
Msx2Q03358 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.77□□□□□ -1.33
Msx2Q03358 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Msx2Q03358 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Msx2Q03358 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Msx2Q03358 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Msx2Q03358 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.76□□□□□ -1.33
Msx2Q03358 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Msx2Q03358 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Msx2Q03358 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.76□□□□□ -1.33
Msx2Q03358 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Msx2Q03358 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Msx2Q03358 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Msx2Q03358 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Msx2Q03358 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC6.76□□□□□ -1.33
Msx2Q03358 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.76□□□□□ -1.33
Msx2Q03358 Gm12090-201ENSMUST00000118692 758 ntBASIC6.76□□□□□ -1.33
Msx2Q03358 Gm15785-201ENSMUST00000119145 694 ntBASIC6.76□□□□□ -1.33
Msx2Q03358 Gm12262-201ENSMUST00000119915 305 ntBASIC6.76□□□□□ -1.33
Msx2Q03358 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Msx2Q03358 Gm25842-201ENSMUST00000122590 322 ntBASIC6.76□□□□□ -1.33
Msx2Q03358 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Msx2Q03358 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.76□□□□□ -1.33
Msx2Q03358 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC6.76□□□□□ -1.33
Msx2Q03358 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.76□□□□□ -1.33
Msx2Q03358 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Msx2Q03358 Gm26393-201ENSMUST00000157625 129 ntBASIC6.76□□□□□ -1.33
Msx2Q03358 Gm25437-201ENSMUST00000158282 132 ntBASIC6.76□□□□□ -1.33
Msx2Q03358 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Msx2Q03358 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Msx2Q03358 Gm4252-201ENSMUST00000174823 313 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms