Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC5.57□□□□□ -1.52
Nkx3-1P97436 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nkx3-1P97436 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm24173-201ENSMUST00000104130 128 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm22371-201ENSMUST00000104588 130 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm11972-201ENSMUST00000118514 389 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm21728-201ENSMUST00000188442 695 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm21889-201ENSMUST00000188487 695 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm20932-201ENSMUST00000189115 694 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm21920-201ENSMUST00000190042 695 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm43501-201ENSMUST00000202513 107 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 AV026068-216ENSMUST00000223874 328 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 AV026068-218ENSMUST00000223980 575 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm22126-201ENSMUST00000083244 142 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 AU020206-202ENSMUST00000206358 3009 ntBASIC5.56□□□□□ -1.52
Nkx3-1P97436 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx3-1P97436 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm25795-201ENSMUST00000104421 132 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms