Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm43048-201ENSMUST00000196101 388 ntBASIC8.98□□□□□ -0.97
Nkx2-3P97334 Gm43431-201ENSMUST00000198577 340 ntBASIC8.98□□□□□ -0.97
Nkx2-3P97334 Gm43493-201ENSMUST00000199837 202 ntBASIC8.98□□□□□ -0.97
Nkx2-3P97334 Gm44162-201ENSMUST00000203543 544 ntBASIC8.98□□□□□ -0.97
Nkx2-3P97334 Gm38840-201ENSMUST00000204716 843 ntBASIC8.98□□□□□ -0.97
Nkx2-3P97334 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC8.98□□□□□ -0.97
Nkx2-3P97334 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.98□□□□□ -0.97
Nkx2-3P97334 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Mir16-2-201ENSMUST00000083672 95 ntBASIC8.98□□□□□ -0.97
Nkx2-3P97334 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Nkx2-3P97334 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm2065-201ENSMUST00000194697 2757 ntBASIC8.97□□□□□ -0.97
Nkx2-3P97334 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm25848-201ENSMUST00000116790 144 ntBASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm16016-201ENSMUST00000120831 550 ntBASIC8.97□□□□□ -0.97
Nkx2-3P97334 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm29299-201ENSMUST00000185609 923 ntBASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm29263-201ENSMUST00000188718 463 ntBASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm28413-201ENSMUST00000189369 291 ntBASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm29573-201ENSMUST00000190291 919 ntBASIC8.97□□□□□ -0.97
Nkx2-3P97334 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nkx2-3P97334 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms