Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Hmgb1P63158 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Hmgb1P63158 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Hmgb1P63158 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Hmgb1P63158 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Hmgb1P63158 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Hmgb1P63158 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Hmgb1P63158 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Hmgb1P63158 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Hmgb1P63158 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.5□□□□□ -1.21
Hmgb1P63158 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Hmgb1P63158 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Hmgb1P63158 Gm37250-201ENSMUST00000194919 2388 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Hmgb1P63158 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Hmgb1P63158 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Hmgb1P63158 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm26416-201ENSMUST00000104280 134 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm4911-201ENSMUST00000119388 945 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm6031-201ENSMUST00000121314 1054 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm3160-201ENSMUST00000128343 607 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm26354-201ENSMUST00000158221 129 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm36448-201ENSMUST00000199916 438 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm43040-201ENSMUST00000202399 558 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm8748-201ENSMUST00000211125 587 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.49□□□□□ -1.21
Hmgb1P63158 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.49□□□□□ -1.21
Hmgb1P63158 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm23734-201ENSMUST00000083753 109 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Hmgb1P63158 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
Hmgb1P63158 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Hmgb1P63158 Gm43826-201ENSMUST00000199604 2612 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7.48□□□□□ -1.21
Hmgb1P63158 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.48□□□□□ -1.21
Hmgb1P63158 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm26417-201ENSMUST00000104274 135 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm25724-201ENSMUST00000104531 117 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm8534-201ENSMUST00000118553 766 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm11796-201ENSMUST00000120208 972 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm12903-201ENSMUST00000121015 544 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm25770-201ENSMUST00000158566 115 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Mir1930-201ENSMUST00000158799 84 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm25574-201ENSMUST00000175245 249 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm17786-201ENSMUST00000182000 427 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm29470-201ENSMUST00000188007 696 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm5305-201ENSMUST00000204010 746 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC7.48□□□□□ -1.21
Hmgb1P63158 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.48□□□□□ -1.21
Hmgb1P63158 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC7.48□□□□□ -1.21
Hmgb1P63158 Gm8616-201ENSMUST00000222175 1037 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 AC161877.2-201ENSMUST00000226248 545 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Hmgb1P63158 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.48□□□□□ -1.21
Hmgb1P63158 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Hmgb1P63158 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmgb1P63158 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms