Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rrp1P56183 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rrp1P56183 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Rrp1P56183 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rrp1P56183 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rrp1P56183 Gm8502-201ENSMUST00000185708 901 ntBASIC7.09□□□□□ -1.27
Rrp1P56183 Gm21147-201ENSMUST00000186046 913 ntBASIC7.09□□□□□ -1.27
Rrp1P56183 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.09□□□□□ -1.27
Rrp1P56183 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rrp1P56183 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Rrp1P56183 Gm5050-201ENSMUST00000197164 775 ntBASIC7.09□□□□□ -1.27
Rrp1P56183 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.09□□□□□ -1.27
Rrp1P56183 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.09□□□□□ -1.27
Rrp1P56183 Gm17994-201ENSMUST00000209260 533 ntBASIC7.09□□□□□ -1.27
Rrp1P56183 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.09□□□□□ -1.27
Rrp1P56183 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Rrp1P56183 AC157572.1-201ENSMUST00000227187 825 ntBASIC7.09□□□□□ -1.27
Rrp1P56183 Glycam1-204ENSMUST00000228895 641 ntBASIC7.09□□□□□ -1.27
Rrp1P56183 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rrp1P56183 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Rrp1P56183 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.09□□□□□ -1.27
Rrp1P56183 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.09□□□□□ -1.27
Rrp1P56183 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Rrp1P56183 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Rrp1P56183 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Rrp1P56183 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Rrp1P56183 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Rrp1P56183 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Rrp1P56183 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Rrp1P56183 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Rrp1P56183 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.08□□□□□ -1.28
Rrp1P56183 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm25415-201ENSMUST00000104220 132 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Gm12778-201ENSMUST00000122341 333 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.08□□□□□ -1.28
Rrp1P56183 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Gm23553-201ENSMUST00000157817 295 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Gm23968-201ENSMUST00000175047 125 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm43744-201ENSMUST00000196387 688 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Gm43561-201ENSMUST00000199866 448 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Gm4860-201ENSMUST00000200368 454 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm9367-201ENSMUST00000205703 546 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm19340-201ENSMUST00000221995 345 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Rrp1P56183 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 Gm43469-201ENSMUST00000196084 4634 ntBASIC7.08□□□□□ -1.28
Rrp1P56183 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rrp1P56183 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rrp1P56183 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Rrp1P56183 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rrp1P56183 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rrp1P56183 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rrp1P56183 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rrp1P56183 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Rrp1P56183 Gm25564-201ENSMUST00000104604 132 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Gm13768-201ENSMUST00000116469 929 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Gm12842-201ENSMUST00000117298 476 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Gm13156-201ENSMUST00000118348 321 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Rrp1P56183 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC7.07□□□□□ -1.28
Rrp1P56183 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rrp1P56183 Gm25550-201ENSMUST00000158079 128 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Gm25025-201ENSMUST00000175018 111 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Rrp1P56183 Mir7669-201ENSMUST00000183442 58 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Gm38030-201ENSMUST00000192376 475 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rrp1P56183 Gm44227-201ENSMUST00000203576 241 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.07□□□□□ -1.28
Rrp1P56183 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.07□□□□□ -1.28
Rrp1P56183 Gm6009-201ENSMUST00000210848 280 ntBASIC7.07□□□□□ -1.28
Rrp1P56183 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC7.07□□□□□ -1.28
Rrp1P56183 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms