Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm21728-201ENSMUST00000188442 695 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm21889-201ENSMUST00000188487 695 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm20932-201ENSMUST00000189115 694 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm21920-201ENSMUST00000190042 695 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Gm32983-201ENSMUST00000208500 505 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Sox3P53784 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.16□□□□□ -1.42
Sox3P53784 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.16□□□□□ -1.42
Sox3P53784 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.16□□□□□ -1.42
Sox3P53784 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.16□□□□□ -1.42
Sox3P53784 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.16□□□□□ -1.42
Sox3P53784 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox3P53784 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sox3P53784 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.16□□□□□ -1.42
Sox3P53784 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox3P53784 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Sox3P53784 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox3P53784 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox3P53784 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Sox3P53784 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sox3P53784 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.15□□□□□ -1.42
Sox3P53784 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Sox3P53784 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Gm14733-201ENSMUST00000117680 133 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Gm12135-201ENSMUST00000119170 466 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Gm14938-201ENSMUST00000119482 943 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Gm13237-201ENSMUST00000122151 635 ntBASIC6.15□□□□□ -1.42
Sox3P53784 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Sox3P53784 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.15□□□□□ -1.42
Sox3P53784 Gm25116-201ENSMUST00000157191 122 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Gm5456-201ENSMUST00000170706 844 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Gm17045-201ENSMUST00000178600 844 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Gm8604-201ENSMUST00000183150 965 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.15□□□□□ -1.42
Sox3P53784 Mir6906-201ENSMUST00000198998 58 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Sox3P53784 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Sox3P53784 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Sox3P53784 Gm45690-201ENSMUST00000210775 246 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Gm45448-201ENSMUST00000211739 209 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Sox3P53784 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.15□□□□□ -1.42
Sox3P53784 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sox3P53784 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox3P53784 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.15□□□□□ -1.42
Sox3P53784 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.15□□□□□ -1.42
Sox3P53784 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox3P53784 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox3P53784 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Sox3P53784 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Sox3P53784 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
Sox3P53784 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox3P53784 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox3P53784 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
Sox3P53784 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox3P53784 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox3P53784 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox3P53784 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.15□□□□□ -1.43
Sox3P53784 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox3P53784 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.15□□□□□ -1.43
Sox3P53784 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Sox3P53784 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox3P53784 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Sox3P53784 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox3P53784 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sox3P53784 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms