Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Sox1P53783 AC121114.1-201ENSMUST00000228522 570 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
Sox1P53783 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Sox1P53783 Gm4822-201ENSMUST00000077551 479 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Gm26003-201ENSMUST00000083061 113 ntBASIC7.4□□□□□ -1.22
Sox1P53783 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Sox1P53783 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sox1P53783 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC7.4□□□□□ -1.22
Sox1P53783 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC7.4□□□□□ -1.23
Sox1P53783 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Sox1P53783 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox1P53783 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC7.4□□□□□ -1.23
Sox1P53783 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
Sox1P53783 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Sox1P53783 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox1P53783 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox1P53783 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox1P53783 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox1P53783 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox1P53783 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Sox1P53783 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Sox1P53783 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
Sox1P53783 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Gm43080-201ENSMUST00000199006 2643 ntBASIC7.39□□□□□ -1.23
Sox1P53783 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Gm43292-201ENSMUST00000199580 2449 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 AC123832.1-201ENSMUST00000214120 2371 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Gm42905-201ENSMUST00000196237 1611 ntBASIC7.39□□□□□ -1.23
Sox1P53783 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Gm37407-201ENSMUST00000194793 1316 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Gm14007-201ENSMUST00000118288 210 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Gm14607-201ENSMUST00000119119 491 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Gm26346-201ENSMUST00000157525 329 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Sox1P53783 Gm28416-201ENSMUST00000188334 292 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Gm3257-201ENSMUST00000207217 675 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Gm9373-201ENSMUST00000208724 599 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Gm3912-203ENSMUST00000211024 367 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.39□□□□□ -1.23
Sox1P53783 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Sox1P53783 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.39□□□□□ -1.23
Sox1P53783 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.39□□□□□ -1.23
Sox1P53783 CT030684.2-201ENSMUST00000228946 826 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Sox1P53783 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Sox1P53783 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Sox1P53783 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Gm22126-201ENSMUST00000083244 142 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Sox1P53783 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Sox1P53783 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.39□□□□□ -1.23
Sox1P53783 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Sox1P53783 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Sox1P53783 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Sox1P53783 Gm37159-201ENSMUST00000192720 3605 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC7.38□□□□□ -1.23
Sox1P53783 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
Sox1P53783 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Sox1P53783 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Sox1P53783 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Sox1P53783 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Sox1P53783 Gm12874-201ENSMUST00000117190 913 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Gm11845-201ENSMUST00000117886 327 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Gm4773-201ENSMUST00000120392 702 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Gm14070-201ENSMUST00000120773 428 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Mup-ps22-201ENSMUST00000121611 243 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.38□□□□□ -1.23
Sox1P53783 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC7.38□□□□□ -1.23
Sox1P53783 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
Sox1P53783 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms