Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm42646-201ENSMUST00000202233 914 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm8168-201ENSMUST00000209631 948 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm33242-201ENSMUST00000212130 1057 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 AC166323.1-201ENSMUST00000217756 367 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 CT009765.2-201ENSMUST00000221331 392 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 AC154634.2-201ENSMUST00000225983 1184 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 CT009539.1-201ENSMUST00000226465 220 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 CT009515.1-201ENSMUST00000228127 586 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Rfx1P48377 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm37132-201ENSMUST00000195553 2238 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rfx1P48377 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Gm38276-201ENSMUST00000192446 1343 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.27□□□□□ -1.09
Rfx1P48377 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rfx1P48377 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Rfx1P48377 AC155710.1-201ENSMUST00000219913 1353 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Gm6913-201ENSMUST00000100019 348 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Gm15078-201ENSMUST00000118371 782 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Gm12881-201ENSMUST00000121191 203 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Gm14048-201ENSMUST00000121864 1268 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC8.26□□□□□ -1.09
Rfx1P48377 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Gm2930-201ENSMUST00000170403 474 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Gm8614-201ENSMUST00000182528 978 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC8.26□□□□□ -1.09
Rfx1P48377 Gm43656-201ENSMUST00000197882 434 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 AC160635.1-201ENSMUST00000216731 474 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 CT030030.1-201ENSMUST00000218809 152 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 AC126673.2-201ENSMUST00000221052 686 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Rfx1P48377 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Rfx1P48377 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Rfx1P48377 Gm43788-201ENSMUST00000201539 2417 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Gm12667-201ENSMUST00000118299 1332 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Rfx1P48377 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rfx1P48377 Gm43781-201ENSMUST00000197634 2681 ntBASIC8.26□□□□□ -1.09
Rfx1P48377 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Rfx1P48377 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Rfx1P48377 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Rfx1P48377 Gm13739-201ENSMUST00000118020 530 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm14610-201ENSMUST00000118358 966 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm15616-201ENSMUST00000118662 375 ntBASIC8.25□□□□□ -1.09
Rfx1P48377 Gm14375-201ENSMUST00000119490 855 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms