Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.59□□□□□ -1.35
Cxcl12P40224 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cxcl12P40224 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.59□□□□□ -1.35
Cxcl12P40224 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cxcl12P40224 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cxcl12P40224 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Cxcl12P40224 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.59□□□□□ -1.36
Cxcl12P40224 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cxcl12P40224 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cxcl12P40224 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Cxcl12P40224 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
Cxcl12P40224 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cxcl12P40224 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.59□□□□□ -1.36
Cxcl12P40224 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.59□□□□□ -1.36
Cxcl12P40224 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Cxcl12P40224 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cxcl12P40224 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm14173-201ENSMUST00000117690 278 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm12482-201ENSMUST00000120435 630 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Mir6362-201ENSMUST00000184329 107 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm29240-201ENSMUST00000187248 286 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm43054-201ENSMUST00000199495 884 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm43456-201ENSMUST00000202519 457 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm33601-201ENSMUST00000210001 961 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Mir133b-201ENSMUST00000083546 119 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm43254-201ENSMUST00000199187 2491 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cxcl12P40224 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Cxcl12P40224 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Cxcl12P40224 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.58□□□□□ -1.36
Cxcl12P40224 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Cxcl12P40224 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cxcl12P40224 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
Cxcl12P40224 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cxcl12P40224 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cxcl12P40224 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Cxcl12P40224 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cxcl12P40224 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cxcl12P40224 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cxcl12P40224 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cxcl12P40224 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm15233-201ENSMUST00000118747 400 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm8855-201ENSMUST00000118888 878 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm12936-201ENSMUST00000121439 301 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.57□□□□□ -1.36
Cxcl12P40224 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.57□□□□□ -1.36
Cxcl12P40224 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm25824-201ENSMUST00000157092 121 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm25603-201ENSMUST00000158361 105 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm18348-201ENSMUST00000191227 820 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm37235-201ENSMUST00000195171 59 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm42437-201ENSMUST00000197263 923 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.57□□□□□ -1.36
Cxcl12P40224 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm45874-201ENSMUST00000212423 346 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm8863-201ENSMUST00000216630 926 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cxcl12P40224 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Gm5514-201ENSMUST00000060477 306 ntBASIC6.57□□□□□ -1.36
Cxcl12P40224 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms