Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm8669-201ENSMUST00000183839 945 ntBASIC9.42□□□□□ -0.9
Chd1P40201 Gm28429-201ENSMUST00000188521 363 ntBASIC9.42□□□□□ -0.9
Chd1P40201 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC9.42□□□□□ -0.9
Chd1P40201 Igkv12-47-201ENSMUST00000196961 356 ntBASIC9.42□□□□□ -0.9
Chd1P40201 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC9.42□□□□□ -0.9
Chd1P40201 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC9.42□□□□□ -0.9
Chd1P40201 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Chd1P40201 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Chd1P40201 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Chd1P40201 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC9.41□□□□□ -0.9
Chd1P40201 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Chd1P40201 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Gm42490-201ENSMUST00000198595 2064 ntBASIC9.41□□□□□ -0.9
Chd1P40201 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Chd1P40201 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Gm13870-201ENSMUST00000117214 1023 ntBASIC9.41□□□□□ -0.9
Chd1P40201 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC9.41□□□□□ -0.9
Chd1P40201 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC9.41□□□□□ -0.9
Chd1P40201 Gm42663-201ENSMUST00000199883 351 ntBASIC9.41□□□□□ -0.9
Chd1P40201 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC9.41□□□□□ -0.9
Chd1P40201 Gm18587-201ENSMUST00000213736 841 ntBASIC9.41□□□□□ -0.9
Chd1P40201 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Chd1P40201 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC9.41□□□□□ -0.9
Chd1P40201 Gm9386-201ENSMUST00000095195 381 ntBASIC9.41□□□□□ -0.9
Chd1P40201 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Chd1P40201 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Chd1P40201 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd1P40201 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd1P40201 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd1P40201 Gm15560-201ENSMUST00000117107 643 ntBASIC9.4□□□□□ -0.9
Chd1P40201 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chd1P40201 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC9.4□□□□□ -0.9
Chd1P40201 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chd1P40201 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC9.4□□□□□ -0.9
Chd1P40201 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC9.4□□□□□ -0.9
Chd1P40201 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC9.4□□□□□ -0.9
Chd1P40201 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC9.4□□□□□ -0.9
Chd1P40201 Gm37308-201ENSMUST00000194684 100 ntBASIC9.4□□□□□ -0.9
Chd1P40201 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC9.4□□□□□ -0.9
Chd1P40201 Gm44132-201ENSMUST00000205142 151 ntBASIC9.4□□□□□ -0.9
Chd1P40201 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC9.4□□□□□ -0.9
Chd1P40201 AC154323.1-201ENSMUST00000228329 1231 ntBASIC9.4□□□□□ -0.9
Chd1P40201 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd1P40201 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd1P40201 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC9.4□□□□□ -0.9
Chd1P40201 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd1P40201 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC9.4□□□□□ -0.9
Chd1P40201 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd1P40201 Gm37022-201ENSMUST00000192517 2254 ntBASIC9.4□□□□□ -0.9
Chd1P40201 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Chd1P40201 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chd1P40201 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chd1P40201 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Chd1P40201 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
Chd1P40201 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd1P40201 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Chd1P40201 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Chd1P40201 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Chd1P40201 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Chd1P40201 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Chd1P40201 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chd1P40201 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC9.4□□□□□ -0.91
Chd1P40201 Gm11498-201ENSMUST00000120660 949 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC9.39□□□□□ -0.91
Chd1P40201 Gm5353-201ENSMUST00000139800 793 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Gm25271-201ENSMUST00000157273 290 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chd1P40201 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC9.39□□□□□ -0.91
Chd1P40201 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC9.39□□□□□ -0.91
Chd1P40201 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC9.39□□□□□ -0.91
Chd1P40201 Gm19174-201ENSMUST00000216944 956 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Clec2j-201ENSMUST00000032517 515 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Chd1P40201 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chd1P40201 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC9.39□□□□□ -0.91
Chd1P40201 Gm11516-201ENSMUST00000118450 1582 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms